BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036B08LP1|AL430180
(915 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1486 1773 0.0
3x_Contig1622 167 5e-41
3x_Contig1722 165 2e-40
3x_Contig1636 163 7e-40
3x_Contig1727 161 3e-39
>3x_Contig1486
Length = 12131
Score = 1773 bits (894), Expect = 0.0
Identities = 912/916 (99%), Gaps = 2/916 (0%)
Strand = Plus / Minus
Query: 1 gtatcatggattaactatcatggcttwcaaatattctttcgagatcgaaagtgcagatca 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 11811 gtatcatggattaactatcatggctttcaaatattctttcgagatcgaaagtgcagatca 11752
Query: 61 atggacgaaagattaaaggattgattaatagtaaaaaaagaatactaatatgaaatcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11751 atggacgaaagattaaaggattgattaatagtaaaaaaagaatactaatatgaaatcatt 11692
Query: 121 tctctgttgttgtcaaaagtaaaggatattatccaggattcacggtattgtataaatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11691 tctctgttgttgtcaaaagtaaaggatattatccaggattcacggtattgtataaatgtc 11632
Query: 181 ttctacgttatattatcttctattagcattgctaataagatatttggacattttacaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11631 ttctacgttatattatcttctattagcattgctaataagatatttggacattttacaagt 11572
Query: 241 aattggtacaaccttacaggcatctcaaaatttctacaacactatactatcattctctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11571 aattggtacaaccttacaggcatctcaaaatttctacaacactatactatcattctctgc 11512
Query: 301 aagcctcctcaagaaagaggcaacatggccgagcggttaaggcgaaagattagaaatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11511 aagcctcctcaagaaagaggcaacatggccgagcggttaaggcgaaagattagaaatctt 11452
Query: 361 ttgggctctg-ccgcgcaggttcgagtcctgctgttgtcgttattttttgttttttcctt 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11451 ttgggctctgcccgcgcaggttcgagtcctgctgttgtcgttattttttgttttttcctt 11392
Query: 420 tttcaatttttccttaccaggttcgaacagataggattgtcagcgacagtttcaatggaa 479
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11391 tttcaatttttccttaccaggttcgaacagataggattgtcagcgacagtatcaatggaa 11332
Query: 480 tatctaacgttagataataggatctaatgagtttaagtactcaatttaccgaataccatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11331 tatctaacgttagataataggatctaatgagtttaagtactcaatttaccgaataccatt 11272
Query: 540 aggagagggccgaatactccttaagtatgctatgtttaaaacttactataacgaaaataa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11271 aggagagggccgaatactccttaagtatgctatgtttaaaacttactataacgaaaataa 11212
Query: 600 aaaaaatcgaaacttaaataaatacaccagaaacaagatgaaatgaagtagagtagaatt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11211 aaaaaatcgaaacttaaataaatacaccagaaacaagatgaaatgaagtagagtagaatt 11152
Query: 660 tcaagaccaaactggaatgggaaggaataaaaaagagagggatatgtacttgcaaactaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11151 tcaagaccaaactggaatgggaaggaataaaaaagagagggatatgtacttgcaaactaa 11092
Query: 720 gttccctccggtgtattagtcttgaactcgaacagaatatcctctaaaaggtcataatcc 779
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11091 gtt-cctccggtgtattagtcttgaactcgaacagaatatcctctaaaaggtcataatcc 11033
Query: 780 ttataaaatgaggactcggactttttatctgctttatcctgtcttgattccgtcatctta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11032 ttataaaatgaggactcggactttttatctgctttatcctgtcttgattccgtcatctta 10973
Query: 840 gcggaattcgtgcttgtgaaatttaccagagactcaatggatccatataacggttccata 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10972 gcggaattcgtgcttgtgaaatttaccagagactcaatggatccatataacggttccata 10913
Query: 900 atttctggtaacagtg 915
||||||||||||||||
Sbjct: 10912 atttctggtaacagtg 10897
>3x_Contig1622
Length = 13445
Score = 167 bits (84), Expect = 5e-41
Identities = 91/92 (98%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 318 aggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgc 376
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4246 aggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgc 4305
Query: 377 aggttcgagtcctgctgttgtcgttatttttt 408
||||||||||||||||||||||||||||||||
Sbjct: 4306 aggttcgagtcctgctgttgtcgttatttttt 4337
Score = 157 bits (79), Expect = 4e-38
Identities = 89/91 (97%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 319 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgca 377
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4752 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 4811
Query: 378 ggttcgagtcctgctgttgtcgttatttttt 408
||||||||||||||||||||||| |||||||
Sbjct: 4812 ggttcgagtcctgctgttgtcgtcatttttt 4842
>3x_Contig1722
Length = 17718
Score = 165 bits (83), Expect = 2e-40
Identities = 90/91 (98%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 319 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgca 377
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1721 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 1662
Query: 378 ggttcgagtcctgctgttgtcgttatttttt 408
|||||||||||||||||||||||||||||||
Sbjct: 1661 ggttcgagtcctgctgttgtcgttatttttt 1631
>3x_Contig1636
Length = 15667
Score = 163 bits (82), Expect = 7e-40
Identities = 89/90 (98%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 319 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgca 377
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 6398 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 6339
Query: 378 ggttcgagtcctgctgttgtcgttattttt 407
||||||||||||||||||||||||||||||
Sbjct: 6338 ggttcgagtcctgctgttgtcgttattttt 6309
>3x_Contig1727
Length = 17872
Score = 161 bits (81), Expect = 3e-39
Identities = 97/100 (97%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 318 aggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgc 376
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 13282 aggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgc 13341
Query: 377 aggttcgagtcctgctgttgtcgtta--ttttttgttttt 414
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 13342 aggttcgagtcctgctgttgtcgttatcttttttgttttt 13381
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8566
Number of Sequences: 1807
Number of extensions: 8566
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 5
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)